exRNAdisease

Entry Detail

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General Information

Database ID: exR0800104 RNA Name: UBAP2L RNA Type: mRNA Chromosome: chr1 Starnd: + Coordinate: Start Site(bp): 154220179 End Site(bp): 154271510 External Links: ENSG00000143569

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC004922.1 chr7 99325879 99394653 + AC007192.1 chr19 18153158 18178117 + AC010422.3 chr19 12643831 12648397 - AC011005.1 chr7 129126518 129130793 + AC091959.3 chr5 146203550 146339251 + ACAP3 chr1 1292390 1309609 - ACTG1 chr17 81509971 81523847 - ADCY6 chr12 48766194 48789037 - ADSL chr22 40346500 40390463 + AGBL5 chr2 27042364 27070622 + AGFG1 chr2 227472152 227561214 + AIP chr11 67483026 67491103 + AKR1A1 chr1 45550543 45570049 + AL022238.4 chr22 40346529 40410054 + AL136454.1 chr1 192716132 192716653 + miRNA targets: NA circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC006064.5 chr12 6510275 6510522 + AC023509.1 chr12 53441741 53467528 + AC055860.1 chr11 18000542 18022931 - AC087190.3 chr16 9104848 9113181 + AC135048.1 chr16 30948386 30956511 + AC245014.3 chr1 145281116 145281462 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.