exRNAdisease

Entry Detail

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General Information

Database ID: exR0800181 RNA Name: UCHL1 RNA Type: mRNA Chromosome: chr4 Starnd: + Coordinate: Start Site(bp): 41256413 End Site(bp): 41268455 External Links: ENSG00000154277

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE83353 Description: Feasibility of unbiased RNA profiling of colorectal tumors: a proof of principle. Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 3 Number of Control: 3 Number of Samples: 6

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand ABHD16A chr6 31686955 31703356 - ABHD8 chr19 17292131 17310236 - AC011448.1 chr19 19516227 19536076 + AC092647.5 chr7 55887277 55955239 + ACTR1A chr10 102461881 102502712 - AHCY chr20 34280268 34311802 - AHSA1 chr14 77457870 77469472 + AL117339.5 chr10 38094368 38360098 + AL360181.3 chr10 133380017 133420271 + ALDH7A1 chr5 126531200 126595362 - miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-187-3p chr18 35904835 35904856 - hsa-miR-302d-3p chr4 112648006 112648028 - hsa-miR-371a-3p chr19 53787716 53787738 + hsa-miR-520a-3p chr19 53690933 53690954 + hsa-miR-525-3p chr19 53697584 53697605 + hsa-miR-423-5p chr17 30117095 30117117 + hsa-miR-3654 chr7 133034860 133034878 - hsa-miR-6801-3p chr19 52222074 52222093 + circRNA targets: NA lncRNA targets: lncRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand AC104109.4 chr5 134205614 134371044 - AD000090.1 chr19 35557956 35581954 + Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 27441409 Title: Feasibility of Unbiased RNA Profiling of Colorectal Tumors: A Proof of Principle. Author: Moshayoff V, Faktor O, Laghi L, Celesti G, Peretz T, Keret D, Cohen D, Israeli E. Journal: PLoS One. 2016 Jul 21;11(7):e0159522. Description: A panel of 8 plasma RNA markers as a preliminary panel for CRC detection and subset markers suitable for AA detection.