exRNAdisease

Entry Detail

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General Information

Database ID: exR0807500 RNA Name: MIRLET7BHG RNA Type: lncRNA Chromosome: chr22 Starnd: + Coordinate: Start Site(bp): 46053869 End Site(bp): 46113928 External Links: ENSG00000197182

Disease Information

Disease Name: Colorectal Cancer Disease Category: Cancers MeSH ID: D003110 Type: Neoplasms/Digestive System Neoplasms Alias: Colonic Neoplasms//Colonic Neoplasm//Neoplasm, Colonic//Neoplasms, Colonic//Colon Neoplasms//Colon Neoplasm//Neoplasm, Colon//Neoplasms, Colon//Cancer of Colon//Colon Cancers//Cancer of the Colon//Colonic Cancer//Cancer, Colonic//Cancers, Colonic//Colonic Cancers//Colon Cancer//Cancer, Colon//Cancers, Colon

Expression Detail

GEO ID: GSE71008 Description: Plasma extracellular RNA profiles in healthy and cancer patients Experimental Design: Cancer vs Control Case Disease Type: Colorectal Cancer Case Disease SubType: NA Case Sample: Colorectal Cancer Control Sample: Healthy Number of Case: 100 Number of Control: 50 Number of Samples: 150

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AGRN chr1 1020120 1056118 + ADAT3 chr19 1905399 1913447 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-98-5p chrX 53556299 53556320 - hsa-miR-520a-5p chr19 53690895 53690915 + hsa-miR-508-3p chrX 147236945 147236967 - hsa-let-7b-5p chr22 46113691 46113712 + hsa-miR-766-5p chrX 119646799 119646820 - hsa-miR-1306-5p chr22 20086072 20086093 + hsa-miR-4500 chr13 87618671 87618687 - hsa-let-7a-5p chr9 94175962 94175983 + hsa-miR-29c-3p chr1 207801865 207801886 - hsa-miR-2116-3p chr15 59171192 59171212 - hsa-miR-6783-3p chr17 44934618 44934639 - hsa-miR-3126-5p chr2 69103691 69103712 + hsa-miR-3180 chr16 15154949 15154967 - hsa-miR-874-3p chr5 137647582 137647603 - hsa-miR-34b-5p chr11 111512950 111512972 + hsa-miR-29b-3p chr7 130877467 130877489 - hsa-let-7f-5p chrX 53557246 53557267 - hsa-let-7d-5p chr9 94178841 94178862 + hsa-miR-183-5p chr7 129774967 129774988 - hsa-miR-1343-3p chr11 34941888 34941909 + hsa-miR-345-3p chr14 100307912 100307933 + hsa-let-7g-5p chr3 52268336 52268357 - hsa-miR-449c-5p chr5 55172313 55172337 - hsa-miR-330-5p chr19 45639049 45639070 - hsa-miR-2682-5p chr1 98045307 98045329 - hsa-miR-3064-5p chr17 64500817 64500837 - hsa-miR-2114-5p chrX 150228016 150228037 + hsa-miR-29a-3p chr7 130876748 130876769 - hsa-miR-605-3p chr10 51299623 51299644 + hsa-miR-132-5p chr17 2049965 2049986 - circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: 26786760 Title: Plasma extracellular RNA profiles in healthy and cancer patients Author: Yuan T, Huang X, Woodcock M, Du M, Dittmar R, Wang Y, Tsai S, Kohli M, Boardman L, Patel T, Wang L Journal: Sci Rep. 2016 Jan 20;6:19413. Description: we performed RNA sequencing analysis on plasma extracellular vesicles derived from 50 healthy individuals and 142 cancer patients.