Entry Detail



General Information

Database ID:exR0839880
RNA Name:TUG1
RNA Type:lncRNA
Chromosome:chr22
Starnd:+
Coordinate:
Start Site(bp):30969245End Site(bp):30979395
External Links:ENSG00000253352



Disease Information

Disease Name:Prostate Cancer
Disease Category:Cancers
MeSH ID:D011471
Type:Neoplasms/Digestive System Neoplasms
Alias:Prostatic Neoplasms//Prostate Neoplasms//Neoplasms, Prostate//Neoplasm, Prostate//Prostate Neoplasm//Neoplasms, Prostatic//Neoplasm, Prostatic//Prostatic Neoplasm//Prostate Cancer//Cancer, Prostate//Cancers, Prostate//Prostate Cancers//Cancer of the Prostate//Prostatic Cancer//Cancer, Prostatic//Cancers, Prostatic//Prostatic Cancers//Cancer of Prostate



Expression Detail

GEO ID:GSE71008
Description:Plasma extracellular RNA profiles in healthy and cancer patients
Experimental Design:Cancer vs Control
Case Disease Type:Colorectal Cancer
Case Disease SubType:NA
Case Sample:Prostate Cancer
Control Sample:Healthy
Number of Case:100
Number of Control:50
Number of Samples:150





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005258.1
chr19
2269525
2341172
+
ACOT7
chr1
6264269
6394391
-
ADNP
chr20
50888916
50931437
-
AGO1
chr1
35869808
35930532
+
AC090004.1
chr3
14135217
14148252
+
ADH5
chr4
99070978
99088801
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-590-5p
chr7
74191213
74191234
+
hsa-miR-3681-3p
chr2
12199174
12199195
+
hsa-miR-7151-5p
chr10
67403388
67403410
-
hsa-miR-216a-3p
chr2
55988981
55989002
-
hsa-miR-9-3p
chr15
89368071
89368092
+
hsa-miR-362-5p
chrX
50008968
50008991
+
hsa-miR-299-3p
chr14
101023832
101023853
+
hsa-miR-145-5p
chr5
149430661
149430683
+
hsa-miR-4465
chr6
140683855
140683876
+
hsa-miR-500b-5p
chrX
50010682
50010699
+
hsa-miR-4766-5p
chr22
40813927
40813947
-
hsa-miR-1294
chr5
154347153
154347174
+
hsa-miR-425-5p
chr3
49020199
49020221
-
hsa-miR-495-3p
chr14
101033804
101033825
+
hsa-miR-499b-5p
chr20
34990443
34990463
-
hsa-miR-519e-5p
chr19
53679953
53679974
+
hsa-miR-3129-5p
chr2
189133082
189133103
-
hsa-miR-1277-5p
chrX
118386401
118386424
+
hsa-miR-153-3p
chr2
219294126
219294147
-
hsa-miR-509-3p
chrX
147258775
147258796
-
hsa-miR-9-5p
chr5
88666902
88666924
-
hsa-miR-511-3p
chr10
17845160
17845179
+
hsa-miR-382-5p
chr14
101054316
101054337
+
hsa-miR-542-3p
chrX
134541364
134541385
-
hsa-miR-27b-3p
chr9
95085505
95085525
+
hsa-miR-1343-3p
chr11
34941888
34941909
+
hsa-miR-221-3p
chrX
45746180
45746202
-
hsa-miR-376a-3p
chr14
101040825
101040845
+
hsa-miR-561-5p
chr2
188297517
188297538
+
hsa-miR-196b-5p
chr7
27169528
27169549
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AD000090.1
chr19
35557956
35581954
+
AL021707.1
chr22
38739003
38749041
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:26786760
Title:Plasma extracellular RNA profiles in healthy and cancer patients
Author:Yuan T, Huang X, Woodcock M, Du M, Dittmar R, Wang Y, Tsai S, Kohli M, Boardman L, Patel T, Wang L
Journal:Sci Rep. 2016 Jan 20;6:19413.
Description:we performed RNA sequencing analysis on plasma extracellular vesicles derived from 50 healthy individuals and 142 cancer patients.